Correlation of Population SARS-CoV-2 Cycle Threshold Values to Local Disease Dynamics: Exploratory Observational Study

Journals

1. Ratcliff J, Al-Beidh F, Bibi S, Bonsall D, Costa Clemens S, Estcourt L, Evans A, Fish M, Folegatti P, Gordon A, Jay C, Jennings A, Laing E, Lambe T, MacIntyre-Cockett G, Menon D, Mouncey P, Nguyen D, Pollard A, Ramasamy M, Roberts D, Rowan K, Rynne J, Shankar-Hari M, Williams S, Harvala H, Golubchik T, Simmonds P, Caliendo A. Highly Sensitive Lineage Discrimination of SARS-CoV-2 Variants through Allele-Specific Probe PCR. Journal of Clinical Microbiology 2022;60(4) View
2. Thongpradit S, Prasongtanakij S, Srisala S, Kumsang Y, Chanprasertyothin S, Boonkongchuen P, Pitidhammabhorn D, Manomaipiboon P, Somchaiyanon P, Chandanachulaka S, Hirunrueng T, Ongphiphadhanakul B, Mahmoud N. A Simple Method to Detect SARS‐CoV‐2 in Wastewater at Low Virus Concentration. Journal of Environmental and Public Health 2022;2022(1) View
3. Sala E, Shah I, Manissero D, Juanola-Falgarona M, Quirke A, Rao S. Systematic Review on the Correlation Between SARS-CoV-2 Real-Time PCR Cycle Threshold Values and Epidemiological Trends. Infectious Diseases and Therapy 2023;12(3):749 View
4. Cava F, San Román J, Barreiro P, Candel F, Álvarez-Timón F, Melero D, Coya N, Guillén R, Cantarero-Prieto D, Lera-Torres J, Cobo-Ortiz N, Canora J, Martínez-Peromingo F, Barba R, Carretero M, Losa J, Zapatero A. Temporal Series Analysis of Population Cycle Threshold Counts as a Predictor of Surge in Cases and Hospitalizations during the SARS-CoV-2 Pandemic. Viruses 2023;15(2):421 View
5. Mishra B, Ranjan J, Purushotham P, Saha S, Payal P, Kar P, Das S, Deshmukh V. High proportion of low cycle threshold value as an early indicator of COVID‐19 surge. Journal of Medical Virology 2022;94(1):240 View
6. Phillips M, Quintero D, Wald-Dickler N, Holtom P, Butler-Wu S. SARS-CoV-2 cycle threshold (Ct) values predict future COVID-19 cases. Journal of Clinical Virology 2022;150-151:105153 View
7. Dehesh P, Baradaran H, Eshrati B, Motevalian S, Salehi M, Donyavi T. The Relationship Between Population-Level SARS-CoV-2 Cycle Threshold Values and Trend of COVID-19 Infection: Longitudinal Study. JMIR Public Health and Surveillance 2022;8(11):e36424 View
8. Penney J, Jung A, Koethe B, Doron S. Utility of the cycle threshold in anticipating the next phase of the coronavirus disease 2019 (COVID-19) pandemic. Infection Control & Hospital Epidemiology 2022;43(6):800 View
9. Lin Y, Yang B, Cobey S, Lau E, Adam D, Wong J, Bond H, Cheung J, Ho F, Gao H, Ali S, Leung N, Tsang T, Wu P, Leung G, Cowling B. Incorporating temporal distribution of population-level viral load enables real-time estimation of COVID-19 transmission. Nature Communications 2022;13(1) View
10. AlBahrani S, Alghamdi M, Zakary N, Jebakumar A, AlZahrani S, ElGezery M, Abdallah K, Al-Tawfiq J. Initial viral cycle threshold values in patients with COVID-19 and their clinical significance. European Journal of Medical Research 2022;27(1) View
11. Qamsari E, Mohammadi P. Evaluation of SARS-CoV-2 RNA Presence in Treated and Untreated Hospital Sewage. Water, Air, & Soil Pollution 2023;234(4) View
12. Harrison R, Hamada A, Haswell N, Groves A, Vihta K, Cella K, Garner S, Walker A, Seale A. Cycle Threshold Values as Indication of Increasing SARS-CoV-2 New Variants, England, 2020–2022. Emerging Infectious Diseases 2023;29(10) View
13. Janostiakova N, Gnip A, Kodada D, Saade R, Blandova G, Mikova E, Tibenska E, Repiska V, Minarik G. SARS-CoV-2 testing in the Slovak Republic from March 2020 to September 2022 – summary of the pandemic trends. Frontiers in Medicine 2023;10 View
14. Ahuja V, Bowe T, Warnock G, Pitman C, Dwyer D. Trends in SARS-CoV-2 cycle threshold (Ct) values from nucleic acid testing predict the trajectory of COVID-19 waves. Pathology 2024;56(5):710 View
15. Fisher L, Kee J, Liu A, Espinosa C, Randhawa A, Ludwig J, Magaret C, Robinson S, Gilbert P, Hyrien O, Kublin J, Rouphael N, Falsey A, Sobieszczyk M, El Sahly H, Grinsztejn B, Gray G, Kotloff K, Gay C, Leav B, Hirsch I, Struyf F, Dunkle L, Neuzil K, Corey L, Huang Y, Goepfert P, Walsh S, Baden L, Janes H, Adams A, Miller E, Rankin B, Shinn S, Follmann D, Miller J, Sadoff J, Nash M, Green S, Jacobsen C, Krishnankutty J, Phungwayo S, Glover R, Slechta S, Holdeman T, Hartvickson R, Grant A, Poling T, Klein T, Klein T, Klein T, Smith W, Gibson R, Winbigler J, Parker E, Wijewardane P, Bravo E, Thessing J, Maxwell M, Horn A, Mary Healy C, Akamine C, Chu L, Chouteau R, Cotugno M, Bauer G, Hachigian G, Oshita M, Cancilla M, Kiersey K, Seger W, Antwi M, Green A, Kim A, Desjardins M, Johnson J, Sherman A, Borger J, Saleem N, Solis J, Carmen Medina M, Keating W, Garcia E, Bueno C, Segall N, Denham D, Weiss T, Avworo A, Hedges P, Becher Strout C, Santiago R, Davis Y, Howenstine P, Bondell A, Marks K, Wang T, Wilkin T, Vogler M, Johnston C, Andrasik M, Andriesen J, Broder G, Eaton N, Gelderblom H, McClennen R, Michael N, Robb M, Sopher C, Miller V, Santiago F, Gomez B, Valika I, Starr A, Cantos V, Kandiah S, del Rio C, Edupuganti S, Graciaa D, Anderson E, Camacho-Gonzalez A, Kamidani S, Rostad C, Teherani M, Diemert D, Malkin E, Siegel M, Roberts A, Simon G, Balani B, Stephenson C, Sperber S, Cicogna C, Zervos M, Kilgore P, Ramesh M, Herc E, Zenlea K, Burgher A, Milliken A, Davis J, Levy B, Kelman S, Doust M, Sample D, Erickson S, Christensen S, Matich C, Longe J, Witbeck J, Peterson J, Clark A, Kelty G, Pena-Renteria I, Koren M, Bartilucci D, Patel A, Tran C, Kennelly C, Brownlee R, Coleman J, Webster H, Fierro C, Leistner N, Thompson A, Gonzalez C, Jackson L, Suyehira J, Haber M, Regalado M, Procasky V, Lutat A, Griffin C, Hollister R, Brown J, Ronk M, Harper W, Cohen L, Eckert L, Hong M, Rouhbakhsh R, Danford E, Johnson J, Calderone R, Khetan S, Olanrewaju O, Zhai N, Nieves K, O'Brien A, Bradley P, Lilienthal A, Callis J, Brosz A, Clement A, West W, Friesen L, Cramer P, Eder F, Little R, Engler V, Rattenbury-Shaw H, Ensz D, Oplinger A, Essink B, Meyer J, Raiser F, Mueller K, Vrbicky K, Harper C, Nutsch C, Lewis W, Laflan C, Whatley J, Harrell N, Shannon A, Rowell C, Dedon C, Makhene M, Gottschlich G, Harden K, Gottschlich M, Smith M, Powell R, Kimmel M, Pinto S, Vachris T, Hutchens M, Daniels S, Wells M, Van Der Leden M, Jackson-Booth P, Baron M, Kane P, Seversen S, Kryvicky M, Lord J, Saleh J, Miles M, Lupercio R, McGettigan J, Patton W, Brakema R, Choquette K, McGettigan J, Kirstein J, Bernard M, Manning M, Rothenberg J, Briskin T, Roadman D, Tedder-Edwards S, Schwartz H, Mederos S, Swaminathan S, Nyaku A, Varughese T, DallaPiazza M, Frey S, Graham I, Abate G, Hoft D, Allen L, Edwards L, Davis W, Mena J, Kutner M, Caso J, Hernandez Moran M, Carvajal M, Mendez J, Wadsworth L, Adams M, Iverson L, Newberg J, Pearlman L, Nugent P, Reynolds M, Bashour J, Schmidt R, Sheth N, Steil K, Toma R, Kirby W, Folmar P, Williams S, Pickrell P, Mott S, Linebarger C, Malbari H, Pampe D, Fragoso V, Holloway L, McKeown-Bragas C, Becker T, Williams B, Jones W, Clark J, Shoptaw S, Vertucci M, Hernandez W, Spector S, Moodley A, Blumenthal J, Stangl L, Deutsch K, Mullane K, Pitrak D, Nuss C, Pi J, Fichtenbaum C, Powers-Fletcher M, Saemann M, Kohrs S, Campbell T, Lauria A, Mancilla J, Dunlevy H, Novak R, Wendrow A, Borgetti S, Ladner B, Laurens M, Chrisley L, Young C, Doblecki-Lewis S, Alcaide M, Gonzales-Zamora J, Morris S, Wohl D, Eron J, Frank I, Dunbar D, Metzger D, Momplaisir F, Martin J, Hoberman A, Shope T, Muniz G, Rupp R, Stanford A, Berman M, Porterfield L, Lewis M, Ghadishah E, Yusin J, Pham M, Creech C, Walker S, Rolsma S, Samuels R, Thomsen I, Kalams S, Wilson G, Lucksinger G, Parks K, Israelsen R, Ostovar J, Kelly K, Overcash J, Chu H, Lee K, De La Cruz L, Clemons S, Everette E, Studdard S, Mohan G, Tyson S, Peay A, Johnson D, Feldman G, Suen M, Muenzner J, Boscia J, Siddiqui F, Sanders J, Peacock J, Nasim J, Levin M, Hussey J, Kulic M, McKenzie M, Deese T, Osmundsen E, Sweet C, Ebuh V, Elnagar E, Ebuh G, Iwuala G, Han-Conrad L, Simmons T, Tarakjian D, Ackermann J, Adams M, Alemán J, Al-Ibrahim M, Andes D, Andrews J, Arduino R, Bäcker M, Badillo D, Bainbridge E, Batteiger T, Bazan J, Bedimo R, Benitez J, Bennett A, Bernstein D, Bialobok K, Boas R, Brady J, Branche A, Brown C, Bunce C, Call R, Campbell W, Carmody E, Carpenter C, Carsons S, Castellon M, Castro M, Catan H, Chang J, Chebib M, Chen C, Cheng M, Chow B, Ciambruschini A, Connor J, Conway J, Cooney M, Curlin M, De La Matta Rodriguez C, Dedon J, Degan E, Dickey M, Dietz C, Dong J, Dorcely B, Dube M, Dyer C, Eckhardt B, Ellerbeck E, Ewers E, Falk A, Feijoo B, Felsen U, Fiel T, Fitz-Patrick D, Fogarty C, Ford S, Forero L, Formentini E, Franco-Vitteri D, Frenck R, Gharib E, Gharib S, Rucker R, Goldenberg J, González L, Gray B, Greene R, Grossberg R, Guanira-Carranza J, Gilberto Guerreros Benavides A, Guillory C, Gunaratne S, Halpert D, Hamilton H, Hartman W, Hatlen T, Henderson S, Herati R, Hernandez Guarin L, Hilder R, Ho K, Hojat L, Hosek S, Jacobson J, Jay M, Johnson D, Jones K, Jones-López E, Justman J, Kahney S, Katz L, Katz M, Kaul D, Keefer M, Kennedy A, Knishinsky J, Kogelman L, Koletar S, Kottkamp A, Laguio-Vila M, Landovitz R, Lee J, Giuvanela Llerena Zegarra E, Lok A, Lovell J, Lubelchek R, Lucaj J, Luckasen G, Luetkemeyer A, Lucia Lugogo N, Maenza J, Malvestutto C, Mauri M, Maves R, Mayer K, McCartney M, McCort M, McElrath M, McNairy M, Merino F, Meyerowitz E, Mitchell C, Monaco C, Muhammad S, Muñoz-Gómez S, Munsiff S, Nee P, Nollen N, Noor A, Nuñez Lagos C, Okulicz J, Oliver P, Ortega J, Palmer S, Parameswaran L, Parikh P, Parker S, Parungao R, Pavie J, Madan R, Peralta H, Petts J, Pierce K, Pretell Alva E, Purpura L, Raabe V, Recuenco S, Richards T, Riddler S, Rizzardi B, Rokser R, Rolle C, Rosen A, Rosen J, Freese L, Santolaya M, Schipani L, Schwartz A, Schwasinger-Schmidt T, Scott H, Sha B, Shankaran S, Shapiro A, Sharp S, Shopsin B, Sims M, Skipper S, Smith D, Smith M, Sobhanie M, Sovic B, Sterling S, Striker R, Tafur Bances K, Talaat K, Tavel E, Tieu H, Tomaszewski C, Tomlinson R, Torres J, Torres J, Treanor J, Tukuru S, Ulrich R, Utz G, Viar V, Viau Colindres R, Walsh E, Walsh M, Walter E, Weidler J, Wu Y, Yang K, Yrivarren Giorza J, Zemanek A, Zhang K, Zingman B, Gorman R, Paez C, Swann E, Takuva S, Greninger A, Roychoudhury P, Coombs R, Jerome K, Castellino F, Tong X, Pavetto C, Gipson T, Tong T, Lee M, Zhou J, Fay M, McQuarrie K, Nnadi C, Sogbetun O, Ahmad N, De Proost I, Hoseyni C, Coplan P, Khan N, Ronco P, Furey D, Meck J, Vingerhoets J, Brandenburg B, Custers J, Hendriks J, Juraszek J, de Groot A, Van Roey G, Heerwegh D, Van Dromme I, Méndez Galván J, Carrascal M, Sordo Duran A, Sanchez Guerrero L, Gómora Madrid M, Barrat Hernández A, Molina Guizar S, González Estrada D, Martínez Pérez S, Zárate Hinojosa Z, Ruiz-Palacios G, Cruz-Valdez A, Pacheco-Flores J, Lara A, Díaz-Miralrio S, Reyes Fentanes M, Olmos Vega J, Pineda Méndez D, Cano Martínez K, Alvarez León W, Ruiz Herrera V, Vázquez Saldaña E, Camacho Choza L, Vega Orozco K, Ortega Domínguez S, Chacón J, Rivera J, Cutz E, Ortegón M, Rivera M, Browder D, Burch C, Moye T, Bondy P, Browder L, Manning R, Hurst J, Sturgeon R, Wakefield P, Kirby J, Andersen J, Fearon S, Negron R, Medina A, Hill J, Rajasekhar V, Williams H, Cade L, Fouts R, Moya C, Anderson C, Devine N, Ramsey J, Perez A, Tatelbaum D, Jacobs M, Menasche K, Mirkil V, Winkle P, Haggag A, Haynes M, Villegas M, Raja S, Riesenberg R, Plavin S, Lerman M, Woodside L, Johnson M, Healy C, Whitaker J, Keitel W, Atmar R, Horwith G, Mason R, Johnson L, Dora T, Murray D, Ledbetter L, Ewing B, Stephenson K, Tan C, Zash R, Ansel J, Jaegle K, Guiney C, Henderson J, O'Leary M, Enright K, Kessler J, Ducheneaux P, Inniss A, Brandon D, Davis W, Lawler D, Oppong Y, Starr R, Syndergaard S, Shelly R, Islam Majumder M, Sugimoto D, Dugas J, Rijos D, Shelton S, Hong S, Schwartz H, Sanchez-Crespo N, Schwartz J, Piedra T, Corral B, Medina C, Dever M, Shah M, Delgado M, Scott T, Usdan L, McGill L, Arnold V, Scatamacchia C, Anthony C, Merchant R, Yoon A, Hill J, Ng-Price L, Thompson-Seim T, Ackerman R, Ackerman J, Aristy F, Ketter N, Finley J, Stull M, Murray M, Rizvi Z, Guerrero S, Paliwal Y, Paliwal A, Gordon S, Gordon B, Montano-Pereira C, Galloway C, Montros C, Aleman L, Shairi S, Van Ever W, Freeman G, Harmon E, Cross M, Sales K, Gular C, Hepburn M, Alderson N, Harshell S, Mahgoub S, Maxwell C, Mellman T, Thompson K, Wortman G, Kingsley J, Pixler A, Curry L, Afework S, Swanson A, Jacqmein J, Bowers M, Robison D, Mosteller V, Garvey J, Easley M, Kurnat R, Cornelison R, Gower S, Schnitz W, Heinzig-Cartwright D, Lewis D, Newton F, Duhart A, Watkins B, Ball B, York J, Pickle S, Musante D, Silver W, Belhorn L, Viens N, Dellaero D, Patel P, Lisec K, Safirstein B, Zapata L, Gonzalez L, Quevedo E, Irani F, Grillo J, Potts A, White J, Flume P, Headden G, Taylor B, Warden A, Chamberlain A, Jeanfreau R, Jeanfreau S, Matherne P, Caldwell A, Stahl J, Vowell M, Newhouse L, Berthaud V, Takizala Z, Beninati G, Snell K, Baker S, Walker J, Harrison T, Miller M, Otto J, Gray R, Wilson C, Nemecek T, Harrington H, Eppenbach S, Bourgeois T, Folsom L, Holt G, Mirsaeidi M, Calderon R, Lichtenberger P, Quintero J, Martinez B, Immergluck L, Johnson E, Chan A, Fas N, Thomas-Seaton L, Khizer S, Staben J, Beresnev T, Jahromi M, Marovich M, Hutter J, Nason M, Ledgerwood J, Mascola J, Leibowitz M, Morales F, Delgado M, Sanchez R, Vega N, Áñez G, Albert G, Coston E, Desai C, Dunbar H, Eickhoff M, Garcia J, Kautz M, Lee A, Lewis M, McGarry A, McKnight I, Nelson J, Newingham P, Price-Abbott P, Reed P, Vegas D, Wilkinson B, Smith K, Woo W, Cho I, Glenn G, Dubovsky F, Fried D, Haughey L, Stanton A, Stevens Rameaka L, Rosenberg D, Tomatsu L, Gonzalez V, Manalo M, Grunstra B, Quinn D, Claybrook P, Olds S, Dye A, Cannon K, Chadwick M, Jordan B, Hussey M, Nevarez H, Kelley C, Chung M, Moran C, Rebolledo P, Bacher C, Barranco-Santana E, Rodriguez J, Mendoza R, Ruperto K, Olivieri O, Ocaña E, Wylie P, Henderson R, Jenson N, Yang F, Kelley A, Finkelstein K, Beckmann D, Hutchins T, Garcia Escallon S, Johnson K, Sligh T, Desai P, Huynh V, Lopez C, Mendoza E, Adelglass J, Naifeh J, Kucera K, Chughtai W, Jaffer S, Davis M, Foley J, Burgett M, Shlotzhauer T, Ingalsbe-Geno S, Duncanson D, Kush K, Nesbitt L, Sonnier C, McCarter J, Butcher M, Fry J, Percy D, Freudemann K, Gebhardt B, Mangu P, Schroeck D, Davit R, Hennekes G, Luft B, Carr M, Nachman S, Pellecchia A, Smith C, Valenti B, Bermudez M, Peraita N, Delgado E, Arrazcaeta A, Ramirez N, Amador C, Marafioti H, Dang L, Clement L, Berry J, Allaw M, Geuss G, Miles C, Bittner Z, Werne M, Calinescu C, Rodman S, Rindt J, Cooksey E, Harrison K, Cooper D, Horton M, Philyaw A, Jennings W, Alvarado H, Baka M, Regalado M, Murray L, Naguib S, Singletary J, Richmond S, Omodele S, Oppenheim E, Martinez R, Andriulis V, Singer L, Blevins J, Thomas M, Hull C, Pereira I, Rivero G, Okonya T, Downing F, Miller P, Rhee M, Stapleton K, Klein J, Hong R, Swan S, Wahlin T, Bennett E, Salzl A, Phan S, White J, Occhino A, Paiano R, McLaughlin M, Swieboda E, Garcia-Fragoso V, Becerra M, White T, Turley C, McWilliams A, Esinhart T, Montoya N, Huskey S, Paul L, Tashima K, Johnson J, Neill M, Sanchez M, Rybak N, Mileno M, Cohen S, Ruiz M, Boswell D, Robison E, Reynolds T, Neumeister S, Zorrilla C, Rivera J, Ibarra J, García I, Sierra D, Ramon W, Fiorillo S, Pitotti R, Anderson V, Castillo Mancilla J, Le N, Winokur P, Ince D, Hegmann T, Meier J, Stapleton J, Stulken L, McArthur M, Berry A, Tapia M, Hammershaimb E, Robinson T, MacBryde R, Kline S, Billings J, Cavert W, Forgosh L, Schacker T, Bold T, Dandachi D, Nelson T, Bran A, Geiger G, Naqvi S, Florescu D, Starlin R, Kline D, Zimmer A, Abbas A, Wilson N, Eron 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SARS-CoV-2 Viral Load in the Nasopharynx at Time of First Infection Among Unvaccinated Individuals. JAMA Network Open 2024;7(5):e2412835 View
16. Park J, Cho S, Kang S, Kim J, Jung S, Lee S, Han K, Hwang S. Long-term trends in cycle threshold values: a comprehensive analysis of COVID-19 dynamics, viral load, and reproduction number in South Korea. Frontiers in Public Health 2024;12 View
17. Takke A, Zarekar M, Muthuraman V, Ashar A, Patil K, Badhavkar A, Trivedi J, Khargekar N, Madkaikar M, Banerjee A. Comparative study of clinical features and vaccination status in Omicron and non-Omicron infected patients during the third wave in Mumbai, India. Journal of Family Medicine and Primary Care 2022;11(10):6135 View
18. Gascó-Laborda J, Gil-Fortuño M, Tirado-Balaguer M, Meseguer-Ferrer N, Sabalza-Baztán O, Pérez-Olaso Ó, Gómez-Alfaro I, Poujois-Gisbert S, Hernández-Pérez N, Lluch-Bacas L, Rusen V, Arnedo-Pena A, Bellido-Blasco J. Cycle Threshold Values of SARS-CoV-2 RT-PCR during Outbreaks in Nursing Homes: A Retrospective Cohort Study. Epidemiologia 2024;5(4):658 View