Automated Real-Time Collection of Pathogen-Specific Diagnostic Data: Syndromic Infectious Disease Epidemiology

Lindsay Meyers   ¹ , BS ;   Christine C Ginocchio   ^{1, 2, 3} , PhD ;   Aimie N Faucett   ¹ , MS ;   Frederick S Nolte   ⁴ , PhD ;   Per H Gesteland   ⁵ , MD, MS ;   Amy Leber   ⁶ , PhD ;   Diane Janowiak   ⁷ , BS, MT (ASCP) ;   Virginia Donovan   ⁸ , MD ;   Jennifer Dien Bard   ^{9, 10} , PhD, D(ABMM) ;   Silvia Spitzer   ¹¹ , PhD ;   Kathleen A Stellrecht   ¹² , PhD ;   Hossein Salimnia   ¹³ , PhD ;   Rangaraj Selvarangan   ¹⁴ , BVSc, PhD, D(ABMM) ;   Stefan Juretschko   ¹⁵ , PhD ;   Judy A Daly   ¹⁶ , PhD ;   Jeremy C Wallentine   ¹⁷ , MD ;   Kristy Lindsey   ¹⁸ , BSc (Health) ;   Franklin Moore   ¹⁸ , MD ;   Sharon L Reed   ¹⁹ , MD ;   Maria Aguero-Rosenfeld   ²⁰ , MD ;   Paul D Fey   ²¹ , BS, PhD, D(ABMM) ;   Gregory A Storch   ²² , MD ;   Steve J Melnick   ²³ , MD, PhD ;   Christine C Robinson   ²⁴ , PhD ;   Jennifer F Meredith   ²⁵ , PhD ;   Camille V Cook   ¹ , BS ;   Robert K Nelson   ¹ , BS ;   Jay D Jones   ¹ , MS ;   Samuel V Scarpino   ²⁶ , PhD ;   Benjamin M Althouse   ^{27, 28} , ScM, PhD ;   Kirk M Ririe   ²⁹ , BS ;   Bradley A Malin   ³⁰ , PhD ;   Mark A Poritz   ³¹ , PhD

¹ BioFire Diagnostics, Salt Lake City, UT, United States

² Hofstra Northwell School of Medicine, Hempstead, NY, United States

³ bioMérieux USA, Durham, NC, United States

⁴ Department of Pathology and Laboratory Medicine, Medical University of South Carolina, Charleston, SC, United States

⁵ Departments of Pediatrics and Biomedical Informatics, University of Utah School of Medicine, Salt Lake City, UT, United States

⁶ Laboratory of Microbiology and Immunoserology, Department of Laboratory Medicine, Nationwide Children's Hospital, Columbus, OH, United States

⁷ Department of Lab Operations, South Bend Medical Foundation, South Bend, IN, United States

⁸ Department of Pathology, New York University Winthrop Hospital, Mineola, NY, United States

⁹ Keck School of Medicine, University of Southern California, Los Angeles, CA, United States

¹⁰ Clinical Microbiology and Virology Laboratory, Department of Pathology and Laboratory Medicine, Children's Hospital of Los Angeles, Los Angeles, CA, United States

¹¹ Molecular Genetics Laboratory, Stony Brook University Medical Center, Stony Brook, NY, United States

¹² Department of Pathology and Laboratory Medicine, Albany Medical Center, Albany, NY, United States

¹³ Department of Pathology, Wayne State University School of Medicine, Detroit, MI, United States

¹⁴ Clinical Microbiology, Virology and Molecular Infectious Diseases Laboratory, Department of Pathology and Laboratory Medicine, Children's Mercy Hospital, Kansas City, MO, United States

¹⁵ Department of Pathology and Laboratory Medicine, Division of Infectious Disease Diagnostics, Northwell Health, Lake Success, NY, United States

¹⁶ Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT, United States

¹⁷ Department of Pathology, Intermountain Medical Center, Murray, UT, United States

¹⁸ Laboratory of Microbiology, University of Massachusetts Medical School-Baystate, Springfield, MA, United States

¹⁹ Department of Pathology and Medicine, Divisions of Clinical Pathology and Infectious Diseases, UC San Diego, San Diego, CA, United States

²⁰ Department of Clinical Laboratories, New York University Langone Health, New York, NY, United States

²¹ Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, United States

²² Department of Pediatrics, Washington University, St. Louis, MO, United States

²³ Department of Pathology and Clinical Laboratories, Nicklaus Children's Hospital, Miami, FL, United States

²⁴ Department of Pathology and Laboratory Medicine, Microbiology/Virology Laboratory Section, Children's Hospital Colorado, Aurora, CO, United States

²⁵ Department of Laboratory Services, Microbiology Section, Greenville Health System, Greenville, SC, United States

²⁶ Northeastern University, Boston, MA, United States

²⁷ New Mexico State University, Las Cruces, NM, United States

²⁸ Department of Neurological Surgery, University of Washington, Seattle, WA, United States

²⁹ bioMérieux, Salt Lake City, UT, United States

³⁰ Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, United States

³¹ BioFire Defense, Salt Lake City, UT, United States